Exploration practices show that the Jurassic System in the hinterland region of the Junggar Basin has a low degree of exploration but huge potential, however the oil/gas accumulation rule is very complicated, and it is difficult to predict hydrocarbon-bearing properties. The research indicates that the oil and gas is controlled by structure facies belt and sedimentary system distribution macroscopically, and hydrocarbon-bearing properties of sand bodies are controlled by lithofacies and petrophysical facies microscopically. Controlled by ancient and current tectonic frameworks, most of the discovered oil and gas are distributed in the delta front sedimentary system of a palaeo-tectonic belt and an ancient slope belt. Subaqueous branch channels and estuary dams mainly with medium and fine sandstone are the main reservoirs and oil production layers, and sand bodies of high porosity and high permeability have good hydrocarbon-bearing properties; the facies controlling effect shows a reservoir controlling geologic model of relatively high porosity and permeability. The hydrocarbon distribution is also controlled by relatively low potential energy at the high points of local structure macroscopically, while most of the successful wells are distributed at the high points of local structure, and the hydrocarbon-bearing property is good at the place of relatively low potential energy; the hydrocarbon distribution is in close connection with faults, and the reservoirs near the fault in the region of relatively low pressure have good oil and gas shows; the distribution of lithologic reservoirs at the depression slope is controlled by the distribution of sand bodies at positions of relatively high porosity and permeability. The formation of the reservoir of the Jurassic in the Junggar Basin shows characteristics of favorable facies and low-potential coupling control, and among the currently discovered reservoirs and industrial hydrocarbon production wells, more than 90% are developed within the scope of facies-potential index FPI>0.5, while the FPI and oil saturation of the discovered reservoir and unascertained traps have relatively good linear correlation. By establishing the relation model between hydrocarbon-bearing properties of traps and FPI, totally 43 favorable targets are predicted in four main target series of strata and mainly distributed in the Badaowan Formation and the Sangonghe Formation, and the most favorable targets include the north and east of the Shinan Sag, the middle and south of the Mobei Uplift, Cai-35 well area of the Cainan Oilfield, and North-74 well area of the Zhangbei fault-fold zone.