The 2,026 earthquake events registered by the Sichuan regional digital seismic network and mobile seismic array after the April 20th, 2013 Lushan earthquake and 28,188 pieces of data were selected to determine direct P waves arrival times. We applied the tomographic method to inverse the characteristics of the velocity structure for the three-dimensional (3D) P wave in the mid-upper crust of the seismic source region of the Lushan earthquake. The imaging results were combined with the apparent magnetization inversion and magnetotelluric (MT) sounding retest data to comprehensively study the causes of the deep seismogenic environment in the southern section of the Longmenshan fault zone and explore the formation of the Lushan earthquake. Research has shown that there are obvious differences in velocity structure and magnetic distribution between the southern and northern sections of the Longmenshan fault zone. The epicenter of the Lushan earthquake is located near the boundary of the high and low-velocity anomalies and favorable for a high-velocity section. Moreover, at the epicenter of the Lushan earthquake located on the magnetic dome boundary of Ya'an, the development of high velocity and magnetic solid medium favors the accumulation and release of strain energy. Low-velocity anomalies are distributed underneath the are of seismogenic origin, The inversion results of the MT retest data after the April 20th Lushan earthquake also indicate that there a high-conductor anomaly occurs under the area of seismogenic origin of the Lushan earthquake, Therefore, we speculated that the presence of a high-conductivity anomaly and low-velocity anomaly underneath the seismogenic body of the Lushan earthquake could be related to the existence of fluids. The role of fluids caused the weakening of the seismogenic layer inside the mid-upper crust and resulted in a seismogenic fault that was prone to rupture and played a triggering role in the Lushan earthquake.